CellDesignerTM
CellDesigner is a structured diagram editor for drawing gene-regulatory and biochemical networks. Networks are drawn based on the process diagram, with graphical notation system proposed by Kitano, and are stored using the Systems Biology Markup Language (SBML), a standard for representing models of biochemical and gene-regulatory networks. Networks are able to link with simulation and other analysis packages through Systems Biology Workbench (SBW).
- Biochemical, Gene Regulatory Networks Modeling with GUI
- Visual Representation of Biochemical Semantics
- Graphical Notation:
CellDesigner supports graphical notation and listing of the symbols based on proposal by Kitano. Mostly compliant to SBGN Process Description Diagram notation. - Linkage to SBW-powered Simulator modules
- SBML compliant
- Easy data exchange with other SBML compliant application.
Check celldesigner.org for detail information.